Interesting - your engine SHOULD have been blue, but if there are traces of orange then it seems you have an oddball that got the "wrong" engine put in, or at least the wrong color paint applied.
There was another example that surfaced where a guy who should have had an orange engine (383 non-R/T 4-speed car) got a blue one instead, so things like this did happen.
Is there a build sheet for the car? Original carburetor?